Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVSSSPNITFMLQ----YTEANPQYV----DYTNREEAVKIDEELSLETNRQMIE--GLTEDELTRIQEAVPETQLNFREYIDYMNRSYATEEQSKELTAIFTQEADYLQKLRLIDLKNKLESAYQNGSLLWQGVISFDNAFLAEQGLYDVATGQVDQKAIKAVMRDMMPTLIQKEGLSDSAFWWGNIHLNTDNIHIHFGLSEVESN-REKIFYQPRGRMEYKGNFSQKTINRF--KSGVYHGLLKEETRSNLLRKEQILANLKADFITSIYQKDKITS--SAEKNFLEQAYNHLPLNKKWRYGSNARDFAVSKFFLDRYLDSYLNNEGSAAYQEFLKETRDFLQTYEGVYSAEKNKIYEKLRKVDGQTIRTLAESKGYDLEHHLARRVMDLRERLANNILRSFREAAPQIQDVQLEKNLESFSVLNQKKILEQHPEASVVKSQKAWQKLGYFVKAGEQPLEIIRPVYKSYDKHGKGIGRPEFVSDTVYDISQLTENIQLKSLTLKDLSLFSSNELKELVDAAKLKTNPTERERRELGTYRYALKLSILESSQKELQVRQKLLEQ---VQPLASDQPFLDFKKQLIAQELQAIALQLTPNYKLSEDDKALKNRLKRQFEDSVALPVSKATPGAIQLPIRQLWTELGLVHHIQDENILTLLKGTSTTKQAYIEELQTHISIFQLKYQINNRNKQISQLSDEATIKEMRIANAKGFSELKRLYDTLQPSDDGQNQISQAVSKQLQERKVIKKAQLQQTQRSGKINTDFMRQLTASLNRSQQASKKALMERARSDEREEQEERRQAQR |
| 4QEI Chain:A ((1-617)) | --IVDRAKMGDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTM---LTPEPVLKTSGHVDKFADFMVKDVKNGE-----RFRADHLLKAHLQKLQQELADLFVNFNLMFKTFI----------GPGGNMPGYLRPETAQGIFLNFKRLLEFNQG------------------KLPFAAAQIGNSFRNEI--SPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNV----------------ADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINN-----------TVLGYFIGR-IYLYLTKVG------ISPDKLRFRQHMEDCWDAESKTSY------GWIEIVGCADRSCYDLSCHARATKVPLV----------------------AEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAIC---------------------------------DECYITEMEMLL------------NEKGEFTIETQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAP--FKCSVLPLSQNQEFMPFVKELSEALTRH----------------------------GVSHKVDDSS------GSIGRRYARTDEIGVAFGV-TIDFDTVNKTPHTATLRDRDSMRQIRAE----ISELPSIVQDLANGN---------------------------------------------ITWADVEARYPLFEGQETGKK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 130622 for 4048 contacts (32.3/contact) +
2D Compatibility (PS) -56338 + (NN) 2255 + (LL) 18668
1D Compatibility (HY) -22000 + (ID) 5550
Total energy: 67657.0 ( 16.71 by residue)
QMean score : 0.122
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