Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MYLEQLKEVNPLTICITNNVVKNFTANGLLALGASPAMSECIEDLEDLLKVANALLINIGTLTKESWQLYQEAIKIANKNQVP-VVLDPVAAGASRFRLEVSLDLLKNYSISLLRGNGSEIAALVGEKQASKGADGGKVADLESIAVKANQVFDVPVVVTGETDAIAVRGEVRLLQNGSPLMPLVTGTGCLLGAVLAAFIGSSDRSDDLACLTEAMTVYNVSGEIAEKVAKGKGVGSFQVAFLDALSQMKSEMIMDK |
| 1JXH Chain:A ((23-288)) | MQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQSVYRI-------EPDFVAAQLDSVFSDVRIDTTKIGML--AETDIVEAVAERLQRHHVRNVVLDTVMLLLSPSAIETLRVRLLPQV-SLITPNLPEAAALLDAPHART------EQEMLAQGRALLAMGCEAVLMKGDWLFTREGEQRFRVNTKNTH-----GTGCTLSAALAALRPRHR--SWGETVNEAKAWLSAALAQADTLEVGKGIGP--------VHHFHAWW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81543 for 1726 contacts (-47.2/contact) +
2D Compatibility (PS) -23186 + (NN) -1598 + (LL) 2160
1D Compatibility (HY) -2000 + (ID) 2050
Total energy: -108217.0 ( -62.70 by residue)
QMean score : 0.356
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