Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIENFLEKNILNKVKLLTLCYDTPSLSLDTACNR-LHLSPVELKNYCHKLNVLFGHKLSIHIQKERILCKLNKLTQEDALKIVYNESNTLQLLKFLIDDSSDKKSLVAFGNDLFLSRSSVYRLRENLIPLIKDLGLSLSKNTIVGDEYRIRYLIAYLTTKFGIKIYDLSALDIKIIRQFLFESGTNIRPTTHLSDIFIFFDTLFILTWKRHHHKVKIPNSKLFSSLKKIFI------YEELNTCVKSIVQPYFNVIFNSEDMDYI----FLIYLTSANSFAAQKWTETHVDEVLAIFKSLPKFQMLLQPLKEALPYSDTYYDELVKVTIYFSRNFIVGLNQLIPETLSFPSTFYPGNNPKLISIIEPIVTHWLTEIGESKFKKTHFFLLCAHLERVIKNSMPPINIVLLTTDFINNEILKDYILQSLSTDKIRFHSYYLLTDNISQISTLKPDLIITNRKLFTYVTKELATNSLVAHIDYNDTPSQISNIQTIISNIKEE-----KYRKIFDKI----- |
| 4OV8 Chain:A ((6-472)) | ---DTLNDVIQDPTRRNKLINDNNLLKGIIMGRDGPVPSSRELIVRPDTLRAIINNRATIETTTME-----AEFT-ETLMESNYN-SASVKVSAPCITANSEYSESSSFKNTE--TEKSMYTSSRYLFPQGRIDFTTPDSGDVIKLSPQFTSGVQAALAK------ATGTEKREALQNLFQEYGCVFRTKVHIG-GVLSAHTMETFSRSENETEVKQDVKAGLEGAVKGWGGGATAGHGNTQGTITTSQNRKLNVKYIVNGGDYTKIQNTEEWVASTNQ--SEHWRVIEVTEVTAVADLLP--QPIRGQVKDLLKPLLGKWVDVEKVP---------GLESL-PVSVYRPKGAIPAGW------------FWL---GDTADASKALLVKPTLPARSGRN--PALTSLHQGSGMTEQPFVDLPQYQYLST---YFGSFAHDTPPGSTLRGLRPDHVLPGRYEMHGDTISTAVY-VTRPVDVPFPEDEAFDLKSLVRVKLPGSGNPPKPRSALKKSMVLFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106447 for 3515 contacts (-30.3/contact) +
2D Compatibility (PS) -46383 + (NN) -6138 + (LL) 5596
1D Compatibility (HY) 4800 + (ID) 4000
Total energy: -152572.0 ( -43.41 by residue)
QMean score : 0.145
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