Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALFFTFLKVSQVIFLVLLIAYASFLVISLVIGGVHLYEKNERKKSLTRNKEKIPISIIVPAYNESTTIVSSIDSLLH---LDYEAYEIIVVDDGSSDNTSDVLKEEFALMKISNTIDSIIATQTCKDVFQRQVGKVKLTLIVKENGGKGDALNMGINAAN--YDYFLCLDADSMLQVDSLSQISKSIQVDPTVIAVGGLVQVAQGVKIEQGKVASYRLPWRIIPCAQALEYDSSFLGARIFLDYLRANLIISGAFGLFKKDLVKAVGGYDTQT---LGEDMELVMKLHFFCRNNNIPYRICYETDAVCWSQAPTNLGDLRKQRRR |
3LW6 Chain:A ((47-207)) | -------------------------------------------------GASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVDRFR-----------------------------------------------FNRASLINVGFQFASDVYDYIAMHDVDLLPLNDNLLYEY------PSS--LGPLH----------------------IA-G---P----------KLHPKYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRD------AGLQVTRPQNIKTGTNDTFSHIHNRYHRKR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -104357 for 1134 contacts (-92.0/contact) +
2D Compatibility (PS) -16338 + (NN) -5152 + (LL) 13592
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -118855.0 ( -104.81 by residue)
QMean score : 0.278
|
|
|