Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIRKLVVMSDSHGDRDIVKDIKNHYLGK-VDAIFHNGDSEL--PSSDPIWEGIH------VVTGNCDYD--------------------------------------SGYPEVLVTKIDNTVIVQTH-------GHLHQINFTWDKLDLLAQQEDADICLYGHLHRADAWK-NGKTIFINPGSVLQPRGPINEKL------YAVVTITDSKVLVEYYTRQHQPYPNLTKEFSR-------------------------- |
| 3QFM Chain:A ((11-268)) | --MTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLPITARVLGNWEDSLWHGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRRVDYDVAAELQLAKDLRLPYFEVYYESLVNGIHHTHHQEFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66575 for 1299 contacts (-51.3/contact) +
2D Compatibility (PS) -18717 + (NN) -6193 + (LL) 352
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -97233.0 ( -74.85 by residue)
QMean score : 0.387
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