Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVATLIIIRGNSASGKSKIAKQLQAELGENTLLLSQDYLRREMLGTKDGENTTTIPLLINLLNYGYHNCSYIILEGILRSD------------WYTPVWKHILKHNPNNTYAYYYDLSFQETVKRHSTRLKSLEFGEDSLARWWLEKDFLK---EIPEKILTKAM-SLEDVKKLIMTDVLP
3KB2 Chain:A ((2-165))
---TLIILEGPDCCFKSTVAAKLSKEL--KYPIIKGSSFELAKSGN---------EKLFEHFNK-LADEDNVIIDRFVYSNLVYAKKFKDYSILTERQLRFIEDKIKAKAKVVYLHADPSVIKKRLRVRGD-EYIEGKDIDSILELYREVMSNAGLHTYSWDTGQWSSDEIAKDIIFLVEL
General information:
TITO was launched using:
RESULT:
Template:
3KB2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49657 for 1081 contacts (-45.9/contact) +
2D Compatibility (PS) -15773 + (NN) -5193 + (LL) 476
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -75797.0 ( -70.12 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3KB2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KB2-query.scw
PDB file :
Tito_Scwrl_3KB2.pdb
: