Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MKNNVKQLFSFEFWQKFGKALMVVIAVMPAAGLMVSIG--NSISLLDPSNVL--LGRIANVI-AQIGWGVIGNLHILFALAIGGSWAKERAGGAFAAGLSFILIN-LITGNFFGVKTDMLADSKATVQTVFGATIRVSDYFVNVLGQPALNMGVFVGIISG-FVGATA---------FNKYYNYRKLPDALTFFNGKRFVPFVVIYRSVIVA-LILSVFWPVVQSGINGFGKWIASS--QDSAPILAPFVYGTLERLLLPFGLHHMLTIPMNYTQLGGTYTVLT-GATKGA-QVLGQD-PLWLAWVGDLINLKGSNSSQYHHLLTSVTPARFK-VGQMIGASGILMGLSYAMYRNVDKD-----------KKLKYKSMFISAAAATF-LTGVTEPIEYMFMFAAMPLYLV-YAVVQGCAFAMADIVNLRVHSFGN------IEFLTRVPMGIKAGLGGDIFNFVWVTLLFAVLMYFI-ANFMIKKFNLATAGRNGNYDNEEVDNAPS-TASGSADANSQVVQVINLLGGRDNIEDVDACMTRLRVTVKDGNSVGSEAAWKKAGAMGLVLKGNGVQAIYGPKADV-LKSDIQDLLDSGTVIPI---VDLETGQPVAAAPVTTYKGITEEIVSVANGQVEALDVVKDPVFSQKM-MGDGFAVEPTDGNIYV-PVSGTVTSVFPTKHAF---GL-LTESGLEVLVHIGLDTV-ALDGQPFEVKI---SSGQKVV-AGDLAVVADLEAIKAAGKETSVIIVFTNVSDIKTVKLEKSGPQIAKTVVAKVEL |
| 4O5P Chain:A ((5-815)) | NFGFHIAPTHPVAGRLTYDSKKLSENILKQQSDERVFSRAQCCKAIHITLGFDGTNNNDKADGSSVSPSCSNVARLIHASIGSGDDINSRGIFKYYCPG------VGTVFPDIKEFTPSNMGLIG------------AEGGENRINWGLVQLVDALFYTLLKSRLKLNDVQGLVEEMSTNWTVSTLTGGLLENGEKKRRAALEPKLKELEEKLRQRQNSGQKPHILAMRLYIYGFSRGAAEARAFANWLQELTRVSDADGRVEYRFAGLPISIEFLGLFDTVAA------VGLPFAAGHMDWADDTMRLPDEALPEDCSFLKRCVHLVSCHEQRASFPLDSIR--RRDMNGRRTGPSCYRKWTVEYAYPGVHSDVGGGYGVGNQGKAVGGSEFLLSQIALQHMYAEAFEAGAPL----QVPEWRVMVPKIEA-EFSVSEELATRFNAWQAQAKAGPLEEVIRRETALITAWRIDRYAGGLRNKAFFANVPPDMPEAQQKAWEALHKRRSREYAAAQ--QLPPMSAAEQAEWDRNVALI----GGEDQLRD-------LRVEKQFDPPLDQRQLLGAAAEFAHDYKGD-----WGVLDDGMTVGGVIDLLLGGTVFLINEEDEAEEYSQIHRDGSARYHQLFSAPDRVAPGQEKLVALFDEQVHDSRAPFTDYF----RYRLVHFDNESNKRLSVLATAGRVVGVGVMLASVGLSVKRR---DPRMLLGGLP-EISAFDPLTGIALPMVGGAALDNLRAFTREPGDKVEQIGQLPPPPPLAVAAVQS--PALQQVLLAQQTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298058 for 5365 contacts (-55.6/contact) +
2D Compatibility (PS) -67435 + (NN) 11209 + (LL) 4360
1D Compatibility (HY) -3200 + (ID) 5900
Total energy: -359024.0 ( -66.92 by residue)
QMean score : 0.132
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