Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLKTPMKAIHKNLLLTRTGDVWAYYRIKSNSIPMQNKEKVESYKKKWQHLFEEITSYEDFHLMMYPSEYELEKRFKDLETDIAADAMDVARYYNEETVRLLEQRLGRLTKYDFILGVKLKSSLVNISVELKDNILSFFNTATDTVVKMLGWEQNVSTSFFEKYEEVEETLANIMASVRGERLSETEMTYINRYHFVRGLKHQTNEESEIKDVRSITNTIIDPTDPSVLHLHSDQDEGYSAFVVIDEFLHNMSESDLFYEAQSLPFPVEVQMKIQTESKSITKPALNLKRQQLKEEQKEQQSTGDRSDVSTVTSATMIRHLQDEIKKEDVHVMNWLSVIVVHGKTKKECVGKATIVKRHLKG-AG-ITCRLPVADQLNLFYKML-PGEKLDITDKNWIQKTTQDGV---AESLF-AVNSDIGSKI-GFFLGWVDRFQEHTDLESAIMSSRDFVLFHPFLANQQLKGSKTRSPHCLITGDTGNGK-SYLAKLIFN-----YISMLNIKSLYIDPKKEMRKWIQRVLNDEYIRENFPLYIAH-LEKYNYITLDHENTHNWGALDPISFLPPMKAKELVQVIF-EQVYDFKGKDDINTAFLR-A-TSEVIDAKQKGEQVGSLDIIRKMQSHPEEAVQKAGDYLNEVVSDSILKLCIHDGSNPALSLEKRITILEVENMDLPDHAERLENYTISQLKSSAVMFALGKFCELFGMNQDEQTVEFIDEAWIFTTSQQGKKVERQMRRIGRSYNNAEYFISQSTKDALKEEDSGNFGVAFAFDEPNEREEVLKWMNMEVTKDNKKMMESMFQGQCLFKDYYGRTSKISIECLFEEWQGALKTVEKKAVAYAEEKYL
4RGL Chain:A ((8-335))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YQPPYTITPAIVNLVAEIGEIIGRYTVLAEQNLTPRLRRENRIRTIQASLAIENNTLTLEQVTAVIDGKRVLGHPREIQEVRNAFATYEAMEDWDASVEGDLLAAHELLMRG----LVDETGRYRSGGVGIFRGEQLVHMAPPADRVPKLMADLLDWLENTNEH-PLVASCIFHYEFEFIHPF--------------------ADGNGRMGRLWQTLILRNWKPLLAYLPVETVIRDRQEDYYRVLAVADSQA----DATPFVEFMLGALRDAVREAVSTDHQVTDQVAALIRAIGGGELSSNDLMQAL-GLSHRPTFRNNYLNPAMEDEWIERTQPDSPRSPTQRYRLTGKGQR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1232 -103326 -83.87 -336.57
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -83.87
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.248

(partial model without unconserved sides chains):
PDB file : Tito_4RGL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RGL-query.scw
PDB file : Tito_Scwrl_4RGL.pdb: