Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKQLKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVTEIEDFEYIVTSSNLEALILEMNLIKKHDPKYNVMLKDDKTYPFIKLTHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRKCSKLPDRVCLYYHLGQCLAPCVKDISEETNRELVESITRFLRGGYNEVKKELEEKMHEAAENLEFERAKELRDQIAHIESTMEKQKMTMNDLVDRDVFAYAYDKGWMCVQVFFIRQGKLIERDVSMFPLYQEADEEFLTFIGQFYSKNNHFLPKEILVPDSIDQSMIEQLLETNVHQPKKGPKKELLMLAHKNAKIALKEKFSLIERDEERSIGAVQKLGEALNI-YTPHRIEAFDNSNIQGTNPVSAMIVFIDGKPYKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLIIIDGGKGQINAARDVIENELGLDIPIAGLAKDEKHRTSNLLIGDPLEVAYLERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSAFQSVLDDIPGIGEKRKKMLLKHFGSVKKMKEASLEDIKKAGVPAAAAQLLYDKLQK
2NRR Chain:A ((344-494))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEALEELMKLLNMKDFPYRIEGIDISHLY---TVASLVVFEDGFPKKGDYRRYKI------DDYESIRTVVKRRYSK-----HPLPNLLFVDGGIGQVNAAIEALKE-IGKDCPVVGLATVVFENREI----------HLPHDHPVLRLLVQIRDETHRFAVSY-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2NRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 692 -22472 -32.47 -162.84
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -32.47
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.594

(partial model without unconserved sides chains):
PDB file : Tito_2NRR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NRR-query.scw
PDB file : Tito_Scwrl_2NRR.pdb: