Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTRQAGEATEASVRWRAVLLAAVAACAACGLVYELALLTLAASLNGGGIVATSLIVAGYIAALGAGALLIKPLLAHAAIAFIAVEAVLGIIGGLSAAALYAAFAFLDELDGSTLVLAVGTALIGGLVGAEVPLLMTLLQRGRVAGAADAGRTLANLNAADYLGALVGGLAWPFLLLPQLGMIRGAAVTGIVNLAAAGVVSIFLLRHVVSGRQLVTALCALAAALGLIATLLVHSHDIETTGRQQLYADPIIAYRHSAYQEIVV---TRRGDDLRLYLDGGLQFCTRDEYRYTESLVY--PAVSDGARSVLVLGGGDGLAARELLRQPGIEQIVQVELDPAVIELARTTLRDVNAGSLDNPRVHVVIDDAMSWLRGAAVPPAGFDAVIVDLRDPDTPVLGRLYSTEFYALAARALAPGGLMVVQAGSPYSTPTAFWRIISTIRSA-GYAVTPY------HVHVPTFGDWGFALARLTDIAPTPAVPSTAPALRFLDQQVLEAATVFSGDIRPRTLDPSTLDNPHIVEDMRHGWD |
| 4UOE Chain:A ((29-224)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKYQNVLVFESTTYGK--VLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYED-KRVNVFIEDASKFLENVT---NTYDVIIVDSSDPIGPA-ETLFNQNFYEKIYNALKPNGYCVAQCES-------LWIHVGTIKNMIGYAKKLFKKVEYANISIPTY-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102138 for 1480 contacts (-69.0/contact) +
2D Compatibility (PS) -21068 + (NN) -15056 + (LL) 26712
1D Compatibility (HY) -16800 + (ID) 3450
Total energy: -131800.0 ( -89.05 by residue)
QMean score : 0.405
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