Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MALPQSALSELLDAFRTGDGVDLIRDAVRLVLQELSELEATERIGAARYERSDTRVTDRN----GARSRVLSTQ-----AGDVELRIPKLRKGSFFPAILEPRRRIDQALYAVVMEAYVHGISTRAVDDLVEAMGVETG-ISKSEVSRICAGLDEIVGAFRTRTLGHIEFPYVYLDATYLNVRNGTGQVVSMAVIV-ASGIAADGSREILGLDVGDSEDETFWRGFLTSLKGRGLGGVRLVISD-----QHAGLVKALKRCFQGAGHQRCRVHFARNLLAHVPKDKADMVASMFRMIFSAPDAEAVHATWEGVRDRLAASFPKIGPLMDDARAEVLAFTA------FPKAHWQKIWSTNPLERINKEIKRRSR--VVGIFPN----------PAAVIRLVGAVLADMHDEWQASERRYLSEASMALLYPDSDNAVVAAISGGQ |
| 4D6W Chain:A ((1-415)) | YLSIAFPEN--TKLDWKPVTKNTRYCPPGLQEESFLSSTPIGATPSKSDGFLCHAAKWVTTCDFRWYGPKYITHSIHNIKPTRSDCDTALASYKSGTLVSLGFPPESC-----------GYASVTDSEFLVIMITPHHVGVDDYRGHWVDPLFVGGECDQSYCDTIHNSSVWIPA---DQTKKNICGQSFTPLTVTVAYDKTKEIAAGGIVFKSKYHSHMEGARTCRLSYCGRNGIKFPNGEWVSLDVKTRIQEKHLLPLFKECPAGT-----------EVRSTLQSDGAQVLTSEIQRIL---DYSLCQNTWDKVERKEPLSPLDLSYLASKSPGKGLAYTVINGTLSFAHTRYVRMWIDGPVLKEPKGKRESPSGISSDIWTQWFKYGDMEIGPNGLLKTAGGYKFPWHLIGMGIVDNELHELSEANPLDHPQLP--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2965 for 2602 contacts (1.1/contact) +
2D Compatibility (PS) -38095 + (NN) 5148 + (LL) 3740
1D Compatibility (HY) -5600 + (ID) 3000
Total energy: -34842.0 ( -13.39 by residue)
QMean score : 0.058
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