Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLSNIQCFVRSAEAGSFAEAARRLGLTPAGVGKNVARLESNLGVRLFQRSTRRLTLTEAGERFLQEVGGSLEGIQTALANVSSVGNQPSGTLKVSMGLAFGRDYILPLLGEFLERYPDIVPDWHFD--NRQVDLIGEG-FDAAIGGGFELPPGVVARNLTPGHLILLASPTYLRDKPPIR-HPGDLGGFDGIRIRSPQTGRVRSWPLRRRNGEEAPIELRERMTMSDPEATCEVAAMGLGITLVCMQHAYAYLESGALVRVLPDWYVDAGNTSLYYAANKLLPAKTRVFVDFVVDYFRRQDLARRFSAFPTG |
| 3ISP Chain:A ((5-296)) | QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVRE-KPCRATTAGIPLLRLAA------QTALLESEALAEMGASLKRTRITIAVNADSMATWFSAVFDGLGDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRP-----THFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCDI----HLDVPLYWQCWKLDSPIIARITDTVRAAASGL--------YRGQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ISP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140647 for 2237 contacts (-62.9/contact) +
2D Compatibility (PS) -29468 + (NN) -2693 + (LL) 1908
1D Compatibility (HY) -8400 + (ID) 2800
Total energy: -182100.0 ( -81.40 by residue)
QMean score : 0.391
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