Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHHYRLPLRRTPPGGSDYALALLLALGGALPASAADAPAPAEEAPPLAGSAPAKADTALGKVTVTARRREEDSQKVPTPITVLGGETLEAQRISRVQDLQQVLPSVNVAYIHARQSSVAVRG-IGNNPASDGLEGSAGIYLD-NVYLGRPGMAV-FDLLDIEQLELLRGPQGTLFGKNTTAGVLNIS-TRAPT------FTAERTVEVSGGQDGYFQGRGTVSGPLGETLAGRLSAYRTRDDGYIKNIHDDNYLNG--GERQGARGQLLFEPNEDFSLRWIADYNEEDSSNGSMVVYG--GAERFWQRAAL----VGASPL----RDPQRRKVNIN----GRQHVSVHQGGSSLEANWNLA---GGYRLTSISAYRYWHFTPANDEQLNVSAINDTGVEVHDRQFSQEIRLASPTGGAFDYVVGAYAFRQNLGNKTFTSYGPLADLYL-LGANLGALNDTYSKANGKIETDSFALFAQGTWHLTERLDFTAGLRGTYEEKNAKVERFAPLGGAAVGGVGAAVRNGQLGAYDSGDL-SQYNFAPSALLSLSYQFSDDLLGYASLSHGEKSGGVNLAVGSAPSAGADSLLVGP-----ERANDAELGLKST--LFDRRLLLNANLFWTGIHGYQATTLYQAP----GST-QLVQVLANAGSVRSRGLEFEATALPLRGLTLNFNGSYNDVTYLSFKDAPCPAEVSTRPGAPSSCDLTGQRVVGASKWIANLNGEYQWRLDDRFQPYVSASYAYRSAAEGTLDNSDLSKIDGYA-LVNLAAGLRSDLGDGQLDTSVWLKNAFDKDYYLSAFASINGSYTASVGQPRTLGVSLRYDF |
| 4RDR Chain:A ((32-748)) | --------------------------------------------SRPRATSGLLHTSTASD--------------------KIISGDTLRQKAVNLGDALDGV-PGIHASQYGGGASAPVIRGQTGRRIKVLNHHGETG---DMADF--SPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVPRYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADIIWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGHSGRPWIDLRNKRYELRAEWKQPFPGFEALRVHLNRNDYRHDEKAGDAVENFFNNQTQNARIELRH--------QPIGR----LKGSWGVQYLQQKSSALSAISEAVKQPML-------------LDNKVQHYSFFGVEQANW---DNFTLEGGVRVEKQKASIQYDK-------------ALIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPR-----YRIGVSGDYVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPA--ARLGFHLKASLTDR---IDANLDYYRVFAQNKLARYE-TRTPGHHML-NLGANYRRNTRYGEWNWYVKADNLLNQSVY--AHSSFLSDTPQM-GRSFTGGVNVKF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 171265 for 5379 contacts (31.8/contact) +
2D Compatibility (PS) -65146 + (NN) 5404 + (LL) 7716
1D Compatibility (HY) 29200 + (ID) 2550
Total energy: 145889.0 ( 27.12 by residue)
QMean score : -0.042
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