Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFHGEDVSQHD----VRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKGERPGESAI-KAKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASDFVYHFLGDS-----------------NRLQL------GNDQHLLFRPHEVSL-SRSAVAEHRAAEVRDIRPLGAITRVTLKVDGQD----ELIEAEVVKDHDSLAGLARGETLYFKPKAFQPVANL |
| 3FVQ Chain:B ((4-347)) | -ALHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIAYGL-----GNGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCRLGRLPVQSGAPAGTRGTLLIRPEQYSLHPHSAPAASIHAVVLKTTPKARHTEISLRA-GQTVLTLNLPSAPTLSDGISAVLHLDGPALFFPGNT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164396 for 2280 contacts (-72.1/contact) +
2D Compatibility (PS) -33337 + (NN) -7625 + (LL) 672
1D Compatibility (HY) -21600 + (ID) 6450
Total energy: -232736.0 ( -102.08 by residue)
QMean score : 0.486
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