Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTDMHDDIPAGSRCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPGL---HKSGEKALNRYMNRTASAALKDVDVVIFVVD-RTRWTEEDQMVLERVQYVSCPVLIAVNKTDRI---EEKADLLPHLEWLTQQLPKAEVVPISAQHGTNLDVLEKLVAERLPESEHFFPEDQITDRSSRFLAAELVREKIMRQLGAELPYQITVEIEEFKQEGRILHIHALILVEREGQKKIIIGDKGERIKSIGQNARKDMEVLFDSKVMLNLWVKVKGGWSDDERALRSLGYGDL |
| 1PUI Chain:A ((11-198)) | FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQQ-----------LINLFEVADG----KRLVDLPGYGEMKRKWQRALGEYLEKRQS-----LQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFS----------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103468 for 1247 contacts (-83.0/contact) +
2D Compatibility (PS) -17955 + (NN) -14339 + (LL) 11408
1D Compatibility (HY) -6400 + (ID) 1900
Total energy: -132654.0 ( -106.38 by residue)
QMean score : 0.536
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