Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKHLRVLTFLALSLPLAAWAEVPVYDGVAANNGGNVPPSGYGTAGAGGAFAGGGVTTPTSVQGELFMQLQQMQDELARLRGTLEEQQNQIQQLKQESLERYQDLDRRISGGGAPAAQNSAPAGAINANGAPAAPAGNNAPAPSSEPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLR------------------KYPNSQYSGNAQYWLGEVNLAKGDLQGAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLAQRDLKNLR |
| 3RKV Chain:A ((189-312)) | ------------------------------------------------------------------------------------------------------------------------------------------------------KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKN---IPLYANMSQCYLNIGDLHEAEETSSEVLKREE---TNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAAS------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12053 for 786 contacts (-15.3/contact) +
2D Compatibility (PS) -11589 + (NN) -6713 + (LL) 7492
1D Compatibility (HY) -400 + (ID) 900
Total energy: -24163.0 ( -30.74 by residue)
QMean score : 0.579
|
|
|