Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLLENK---ASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDK-EQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
1KEQ Chain:A ((4-241)) | -----------------------------------------------GTRQSPINIQWKDSVYDPQLAPLRVSYDAAS-CRYLWNTGYAFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTK-YENCKKASVGENGLAVIGVFLKLGA-HHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLMPAC---RDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFRL------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65332 for 1949 contacts (-33.5/contact) +
2D Compatibility (PS) -25285 + (NN) -10461 + (LL) 5784
1D Compatibility (HY) -14000 + (ID) 3700
Total energy: -112994.0 ( -57.98 by residue)
QMean score : 0.299
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