Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKFNKPLLALLIGSTLCSAAQAAAPGKPTIAWGNTKFAIVEVDQAATAYNNLVKVKNAADVSVSWNLWNGDAGTTAKILLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFV----EWGVYG---R---NFTVDKIPA---QNLTHLLYGFIPICGGNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPF-------FF-MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRK---YELTSAISAGKDKIDK--VAYNVAQNSMDHIFLMSYDFYGPFDLKNLGHQTALNAPAWKPD------------------------TAYTTVNGVNALL-AQGVKPGKVVVGTAMYGRGWTGVNGYQNN--IPFTGTATGPVKG-------------TWKNGIVDYRQIAGQFMS-GEWQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDAD--NGDILNSMNASLGNSAGVQ |
| 1GOI Chain:A ((6-425)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------AVIG-YYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINS-NL-------------------------ECAW-DPA----T-------NDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYG-FDGVNIDWEYPQ----------AAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEK-VTNHQAALFGDAAGPTFYNALREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLVGCEECVRDKDPRIASYRQLEQMLQGNYGYQRLWNDKTKTPYLYHAQNGLFVTYDDAESFKYKAKYIKQQQLGGVMFWHLGQDNRNGDLLAALDRYFNAA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151908 for 2920 contacts (-52.0/contact) +
2D Compatibility (PS) -37302 + (NN) -15864 + (LL) 10652
1D Compatibility (HY) -25200 + (ID) 5350
Total energy: -224972.0 ( -77.05 by residue)
QMean score : 0.386
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