Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVCSAAPLLLLATTLPLLGSPVAQASQPVSETGVRPREGLQRRQWGPLIGRDKAWNERIDRPFPACPIPLSSSFGRWPKGQTMWAQTSTLTLTEEELGQSQAGGESGSGQLLDQENGAGESALVSVYVHLDFPDKTWPPELSRTLTLPAASASSSPRPLLTGLRLTTECNVNHKGNFYCACLSGYQWNTSICLHYPPCQSLHNHQPCGCLVFSHPEPGYCQLLPPGSPVTCLPAVPGILNLNSQLQMPGDTLSLTLHLSQEATNLSWFLRHPGSPSPILLQPGTQVSVTSSHGQAALSVSNMSHHWAGEYMSCFEAQGFKWNLYEVVRVPLKATDVARLPYQLSISCATSPGFQLSCCIPSTNLAYTAAWSPGEGSKASSFNESGSQC--FVLAVQRCPMADTTYACDLQSLGLAPLRVPISITIIQDGDITCPEDASVLTWNVTKAGHVAQAPCPESKRGIVRRLCGADGVWGPVHSSCTDARLLALFTRTKLLQAGQGSPAEEVPQILAQLPGQAAEASSPSDLLTLLSTMKYVAKVVAEARIQLDRRALKNLLIATDKVLDMDTRSLWTLAQARKPWAGSTLLLAVETLACSLCPQDHPFAFSLPNVLLQSQLFGPTFPADYSISFPTRPPLQAQIPRHSLAPLVRNGTEISITSLVLRKLDHLLPSNYGQGLGDSLYATPGLVLVISIMAGDRAFSQGEVIMDFGNTDGSPHCVFWDHSLFQGRGGWSKEGCQAQVASASPTAQCLCQHLTAFSVLMSPHTVPEEPALALLTQVGLGASILALLVCLGVYWLVWRVVVRNKISYFRHAALLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVL-----LGYLCPLGLAGVTLGLYLPQGQYLREGECWLDGKGGALYTFVGPVLAIIGVN-GLVLAMAMLKLLRPSLSEGPPAEKRQAL-------LGVIKALLILTPIFGLT-WGLGLATLLEEVSTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCRAQAPSSTISLVSCCLQILSCASKSMSEGIP-WPSSEDMGTARS- |
| 4QOY Chain:C ((5-886)) | ------------------------------PNDVDPIETRDWLQAIESVIREEG-------------------------------VERAQYLIDQLLAEARKGG-------VNVAAGTGISNYINTIPVEEQPE--YPGNLELERRIRSAIRWNA---IMTVLRASKKDL--ELGGHMASFQSSATIYDVCFNHFFRAR---NEQDGGDLVY-----------FQGHISPGVYARAFLEGRLTQEQLD------NFRQEVHGNGLSSY------PHPKLMPEFWQFPTVS------MGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSG----KLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWT---------DEQIWALNRGGHDPKKIYAAFKKAQETK-------GKATVILAHTIKGYGMGDAAIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYIT---FPEGSEEHTYLHAQRQKLHGY-----------------------LPSR-------QPNF--TEKLELPSLQDFGALLEEQS--------KEISTTIAFVRALNVMLKNK-----------SIKDRLVPIIADEARTFGMEGLFRQIG--------------IYSPNGKEDEKG---QILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYY-------SMFGFQRIGDLCWAAGDQQARG------------FLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPA---YAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLG-SGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTY--VPADDYRVLGTDG------FGR---SDSRENLRHHF-EVDASYVVVAALGELAKRGEIDKKVVADAIAKFNIDADKVNPRLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -572022 for 7474 contacts (-76.5/contact) +
2D Compatibility (PS) -87705 + (NN) -3647 + (LL) 12060
1D Compatibility (HY) -11200 + (ID) 7100
Total energy: -669614.0 ( -89.59 by residue)
QMean score : 0.204
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