Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------MTSRSVCEKMTMTTENPNQTVVSHFF------LEGLRYTAKHSSLFFLLFLLIYSITVAGNLL---------ILLTVGSD---SHLSLPMYHFLGHLSF----LDACLSTVTVP--KVMAGLLTLDGKVISFEGCAVQLYCFHFLASTECFLYTVMA--------YDRYLAIC---QPLHYPVAMNRR-MCAEMAGITWAIGATHAAIHTSLTFRLLYC----GPCHIAYFFCDIPPVLKLACTDTTINEL-VMLASIGI---------------VAAGCL---ILIVISYIFIVA---AVLRIRTAQG--RQRAFSPCTAQLTGVLLYYVPPVCIYLQP-----RSSEAGAGAPAVFYTIVTPMLNPFIYTLRNKEVKHALQRLLCSSFRESTAGSPPP |
| 4HU8 Chain:A ((3-452)) | NEITLTIGQQKDLASMVPAKFAGQELSWTSSDPETASVTDKGIVTALKFSSGGANLFLKAPATGEAIITVTAGKQSHSVKVITTVKGKEDIEKLPPLKDHFKDYFLIGNIFNNRDVSGSMMDNDWLAHHYAILTPENHMKPSNLTNNRNETTGEITYTFSTADRMVNAAIAEGLKIHGHTLLWHQQIPPWQRSMESAAKDAALSVMKKYITEVMTHYKGKIYSWDVLNEIFPDGRGDNWTTAMRPENPWFKSIGSDFVYEAYLAARQADPNAILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRLLIEGIGMQSHHNMDVPASNIRNTINRYRELGVKISVSELDILCMGWSAFRGSTGQGADKDDMTIATNRNILDQAYKFNEYMKLYLENSDIIERVSMWGVSDRYSWRSGGLPLLFD-----ADNKAKPAYYSFV--RAREDYEAAKA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285077 for 2372 contacts (-120.2/contact) +
2D Compatibility (PS) -33379 + (NN) 1390 + (LL) 544
1D Compatibility (HY) -400 + (ID) 2650
Total energy: -319572.0 ( -134.73 by residue)
QMean score : 0.140
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