Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MSGDNSSSLTPGFFILNGVPGLEATHIWISLPFCFMY-IIAVVGNCGLICLISHEEALHR-PMYYFLALLSFTD--------------------------VTLCTTM-V-PNMLCIFWF----NLKEIDFNACLAQMFF---VHMLTGMESGVLMLM-----------ALDRYVAI-C-YPLRYATILTNPVIAKAGLATFLRNVMLIIPFTL--LTKRLPYCRGNFIPHTYCDHMSVAKVSCGNFK----------------VNAIYGLMVALLIGVFDICC--ISVSYTMILQAVMSLSSADARHKAFSTCTSHMCSIVITYVAAFFT-----------FFTHRFV-------GHNIPNHIHIIVANLYL-LLPPTMNPIVYGV-KTKQIQEGVIKFLLGDKVSFTYDK |
| 4QT9 Chain:A ((19-432)) | LSDDALMDTVQRRTFLYFWEGAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYV---TREEGLARME--RIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAAS-PTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLRYQGTEAGPLFWA-QYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDD--KGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIAVMIENYRTGLLWKLFMSHPDVQAGLTKL------GFNTN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -331508 for 2379 contacts (-139.3/contact) +
2D Compatibility (PS) -30383 + (NN) 3994 + (LL) 1432
1D Compatibility (HY) -5200 + (ID) 3000
Total energy: -364665.0 ( -153.28 by residue)
QMean score : 0.172
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