Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------MPLFNSLCWFPTIHVTPPSFILNGIPGLERVHVWISLPLCTMYIIFLVGNLGLVYLIYYEESLHHPMYFFF-GHALSLIDLLTCTT----------TLPNALCIFWFSLKEINFNACLA------QMFFVHGFTGVESGVLMLMALDRYVAI-----------------------------CYPLRYATTLTNPIIAKAEL------ATFLRGVLLMIPFPFLVKRLPFCQSNIISHTYCDHMS------VVKLSCASIKVNVIYGLMVALLIGVFDICCISLS---------YTLILKAAISLSSSDARQKAFSTCTAHISAIIITYVPAFFTFFAHRFG-GHTIPPSLHII-----VANLYLLLPPTLNPIVYGVKTKQ-IRKSVIKFFQGDKGAG |
| 3MKT Chain:A ((2-461)) | ENSVHRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQKQSDDVQLHLAAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265949 for 2664 contacts (-99.8/contact) +
2D Compatibility (PS) -31359 + (NN) 11505 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 2300
Total energy: -303703.0 ( -114.00 by residue)
QMean score : 0.133
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