Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MARENHSL---------------------AAEFILIGFTNYPELKTLLFVV---------FSAIYLVTMVGNLGLVALIYVERRLLTPM----YIFLGNLALMDSCCSCAVTPKMLENFFSEDRIIS----LYEC--MAQFYFLCLAETTDCF-----LLATMAYDRYVAICHPLQYHTMMSKTLCIRMTTG----AFKAGNLHSMIHVGLLLRLTFCRSNKIHHFFCDILPLY--RLSCTDPSINELMIY-------------IFSIPIQIFTI--------ATVLISYLCI---LLTVFKMKSKEGRGK-AFSTCASH-----FLSVSIFYICLLM-------------------YIGPSEEGDKDTPVAIFYAIVIPLLNPFIYSLRNKEVINVLKKIMRNY-NILKQTCSIANLFLIY------------ |
| 4OPU Chain:A ((2-453)) | MKELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMP-YPKGEELENKINGIKLYSPDMQTVWTVNHEG-FELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGK--NKVNVGLGIQGGM-GYPSIHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSNDDINYGMKKKIIKEEDLLEASEKGDLHLSVADKAMRVISGLGRPSLLFKLKAVAESMKKIKELYLNYPRSPSSLGSWRREVDNVLTEFNKSLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224638 for 2018 contacts (-111.3/contact) +
2D Compatibility (PS) -32402 + (NN) -2761 + (LL) 116
1D Compatibility (HY) -6800 + (ID) 3350
Total energy: -269835.0 ( -133.71 by residue)
QMean score : 0.026
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