Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MQPYTKNWTQVTEF-------VMMGF-AGIHEAHLLFFILFLTMYLFTLVENLAIILVVGLDHRLRRPMYFFL----------THLSCLEIWYTSVTVPKMLAGFIGVDGGKNISYADCLSQLFIFTFLGATECFLLAAMAYDRYVA-----ICMPLHYGAFVSWGTCIRLAAACWLVGFLTPIL----------------------PIYLLSQLTFYGPNVIDHFSCDASPLLALSCSDVTWKETVDFLVSLAVLLASSMVIAVSYGNIVWTLLHIR--SAAERWKAFSTCAAHLTVVSLFYGTLFFMYVQTKVTSSINFNKVVSVFYSVVT-----PMLNPLIYSLRNKEVKGALGRVFSLNFWKGQ-------------------- |
| 1H3F Chain:A ((5-432)) | GHTPEEALALLKRGAEEIVPEEELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTRENAKTYVAQAGKILRQEPHLFELRYNSEWLEGLTFKEVVRLTSLMTVAQMLEREDFKKRYEAGIPISLHELLYPFAQAYDSVAIRADVEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGREKMSKSLDNYIGLTEPPEAMFKKLMRVPDPLLPSYFRLLTDLEEEEIEALLKAGPVPAHRVLARLLTAAYALPQIPPRIDRAFYESLGYAWEAFGRDKEAGPEEVRRAEARYDEVAKEEIPEVTIPASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDLSRPRILQRGKDRFVRVRLSD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286001 for 2179 contacts (-131.3/contact) +
2D Compatibility (PS) -32169 + (NN) 3559 + (LL) 0
1D Compatibility (HY) 2000 + (ID) 1700
Total energy: -314311.0 ( -144.25 by residue)
QMean score : 0.176
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