Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGI-ENFELLKVLGTG-AYGKVFLVRKISGHDTGKLYAMKVLKKATIV-QKAKTTEHTRTERQVLEHIRQ-SPFLVTLHYAFQTET-KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH-KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA-YSFCGTIEYMAPDIVRGGDSGHD----KAVDWWSLGVLMYELLTGASP------FTVDGEKNSQAEISRRILKS------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN---WDDLAAKKVPAPFKPVIRDELDVSNFAEEFTEM----DPTYSPAALPQSSEKLFQGYSFVAPSILFKRNAAVIDPLQFHMGVERPGVTNVARSAMMKDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKREGFCLQNVDKAPLAKRRKMKKTSTSTETRSSSSESSHSSSSHSHGKTTPTKTLQPSNPADSNNPETLFQFSDSVA |
| 1CDK Chain:A ((8-350)) | -------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H-LDQFERIKTLGT-GSFGRVMLVKH--KETG-NHFAMKILDKQKVVK--LKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-K--G--RTWTLCGTPEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG---YPPFFAD-------QPIQIYEKIVSGKVRFPS------HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI--------NEKCGKEFSEF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161179 for 2428 contacts (-66.4/contact) +
2D Compatibility (PS) -33480 + (NN) -10406 + (LL) 26984
1D Compatibility (HY) -26400 + (ID) 5900
Total energy: -210381.0 ( -86.65 by residue)
QMean score : 0.503
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