Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKS--LHHPNIVGYRAFTE---ANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQ-------EKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTV-TDPEACYIGTEPWKPKEAVEENG-----VITDKADIFAFGLTLWEMMTL----------SIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEEL-DESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
| 3Q4U Chain:A ((12-300)) | ---------------------------------LLECVGKGRYGEVWRGSWQG-----ENVAVKIFSSR--------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND--------PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3Q4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -63824 for 2098 contacts (-30.4/contact) +
2D Compatibility (PS) -28354 + (NN) -16963 + (LL) 2412
1D Compatibility (HY) -14400 + (ID) 3200
Total energy: -124329.0 ( -59.26 by residue)
QMean score : 0.417
|
|
|