Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDDATVLRKKGYIVGINLGKGSYAKVKSAYSERLKFNVAVKIIDRKKTPTDFVERFLPREMDILATVNHGSIIKTYEIFETSDGRIYIIMELGVQGDLLEFIKCQGALHEDVARKMFRQLSSAVKYCHDLDIVHRDLKCENLLLD---KDFNIKLSDFGFSKRCLRDSNGRIILSKTFCGSAAYAAPEVLQSIPYQPKVYDIWSLGVILYIMVCGSMPYDDSDIRKML-RIQK-EHRVDFPRSKNLTCECKDLIYRMLQPDVSQRLHIDEILSHSWLQPPKPKATSSASFKREGEGKYRAECKLDTKTGLRPDHRPDHKLGAKTQHRLLVVPENENRMEDRLAETSRAKDHHISGAEVGKAST
3UPX Chain:A ((34-286))-----------------LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKM---KDKIGTAYYIAPEVLHG-TYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ-------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3UPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -169514 for 1915 contacts (-88.5/contact) +
2D Compatibility (PS) -26850 + (NN) -16079 + (LL) 5784
1D Compatibility (HY) -19600 + (ID) 4600
Total energy: -230859.0 ( -120.55 by residue)
QMean score : 0.402

(partial model without unconserved sides chains):
PDB file : Tito_3UPX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UPX-query.scw
PDB file : Tito_Scwrl_3UPX.pdb: