Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------MSNFCKIIYGNNDNQLSEKSYKSSVCNDDLFNGNEEDFVILENE---KMYKTKAEFESEGYKII-------------- |
2LVC Chain:A ((1-90)) | HMPVHIVDPREHVFVHAITSECVMLACEVDREDAPVRWYK-----DGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDECAYFTVTI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7873 for 283 contacts (27.8/contact) +
2D Compatibility (PS) -6098 + (NN) -1237 + (LL) 64
1D Compatibility (HY) -800 + (ID) 700
Total energy: -898.0 ( -3.17 by residue)
QMean score : ?
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