Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEKKLKAAVVLSGCGHLDGAEVREVVLSLLVLDQQEVEVKCFAPDINITQVVNHKTTEAVKEKRNVLVEAARVARSEICDLKEAKAEDFDMLVVPGGYGVAKNLSDLAEDKEVVTVIPEFERLVSEFFATKKPIGAICISPAIIVS--ILSSKTSKGESKIKVTIGDDREKLIEKLGGEHIKCDTGLSIEDEEHNVFSCSAYMR---RDESTYSVYQGIKHMIDSMVKKTNKRI
3L18 Chain:A ((-1-165))
----SMKVLFLS-----ADGFEDLELIYPLHRIKEEGHEVYVASFQRGKITGK-----------HGYSV-------NVDLTFEEVDPDEFDALVLPGGKAPEI-VR----------LNEKAVMITRRMFEDDKPVASICHGPQILISAKVLKG--------RRGTSTITIRDDVINAGAEWID----AEVV-VDGNWVSSRHPGDLYAWMREFVKLLH-----------------
General information:
TITO was launched using:
RESULT:
Template:
3L18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142108 for 1442 contacts (-98.5/contact) +
2D Compatibility (PS) -17440 + (NN) -4397 + (LL) 3596
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -165949.0 ( -115.08 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_3L18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L18-query.scw
PDB file :
Tito_Scwrl_3L18.pdb
: