Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGDTPFKATSMEDLNDTISKIINYRFKNDAILEEALTHPSLNKRNSKNQIENYERLEFLGDSILNMIVSAILFRLFPKEKEGALARRKTDLVCGNTIANVAKEIKLGNFIIMNNSERCNGGKRNLKNLENALEALIGAIYIDGGFAN--VKKFVTKHWEERAKGML---SLPQDPKTSLQEWTQKNKLPLPEYELMKQTGPAHSPEFTISICIENYGKVFACASSKKVAEQKAAELMLEKINNSEKTI
2NUG Chain:A ((3-218))-------------MLEQLEKKLGYTFKDKSLLEKALTHVSYSK------KEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRG------KINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLE------


General information:
TITO was launched using:
RESULT:

Template: 2NUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90831 for 1554 contacts (-58.4/contact) +
2D Compatibility (PS) -23012 + (NN) -11825 + (LL) 548
1D Compatibility (HY) -16000 + (ID) 3650
Total energy: -144770.0 ( -93.16 by residue)
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2NUG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NUG-query.scw
PDB file : Tito_Scwrl_2NUG.pdb: