Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLGIEKRGITNALWKLQEADQREVLTLTQRFELPEILARTLAIRGVNIENAGNFLYPLIRSLLPDPFHLLDMDKAVFRIIQAINNDENIAIFGDYDVDGATSSALISRYLRAIGIHSIIYIPDRVDEGYGLNSNALLQLKKKGIDLCISVDCGTLAY-QPIEDAKGFGLD-----VIVIDHHLGTEKLPSAIAVVNPNRLDE-SSPYNSLAAVGVSFLLTVALNKSLREQDFFAGKKEPDLFDLLDLVALGTVCDVMQITGLNRAFVSQGLKVMSARKNVGLRVLFDALGILERPNVSRLSFNIGPCINAGGRIGEALLGARLL-STDDKKEADSIALKLIDLNNARK-MMENEALLEAIIQ-VEKSTQSGANFIMVSGNWHQGVIGIIASRLKEKFHLPTIVISLNNRIGKASCRSIPGVDIGAAVLSAKCMNLII-EGGGHSMAAGFLINEDKMSDLH-DFLTERFAYSTNDKALKVDGIVTAKAINLSLWNQLQRLEPFGVGNPEPRFIIQGAKIRKPEIVGVDHIKCFIVDDDVMVRAIAFRS-ANTHLGSAIM-EGNIEAILGKISMNYWNGNEFVQFLIEDVLTIS |
| 4NAR Chain:A ((4-423)) | -------------------------------------------------------------YLEGDPLTEEKIKEGLSKLVEDLGKVKKVLVVHTDYTRVDFTHLVAKNLYRFLLERGL-----------------------KEFHTLNAS--GTHRTMKIEEFEKKLGISRNERRVFFHNHEFFNPEALAFVGTLPAGFVSEMTEGDLEEE-------IPIKVNRLLFED-----------FDAIFFINGTVPHESTGFSGGLKIVI---------------------------PGI------------ASTEVVDTFHWAAVLMGIPKLIGTVDNPARKI-INRASEMIFEKIKARSFTLNMVYEEEEEVIPRALYIDEGYEGFLRAYEKACELSSQLHVKYIDRPLRRAVQVIGEEYDEVWTAGKGSYKLQRPGVMAKGGQIIIYAPHIKRFH-SNPQMDKWIREIGYHCKDYVKWYLKKHPDFNKNVAAHVINVR----GAGTFDPE---TGKEEFEFDVILATSI------PEDECRAVNLGYMDPSKIKKEDFMDEDSLWIVP-------GGKYLYDLK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130532 for 3545 contacts (-36.8/contact) +
2D Compatibility (PS) -43077 + (NN) -12966 + (LL) 13284
1D Compatibility (HY) -5600 + (ID) 2650
Total energy: -181541.0 ( -51.21 by residue)
QMean score : 0.185
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