Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWD---VDVVLECTGAFNKRAEAAKH---NTGKVIVSAPVSDADITIVYGVNNDML-KKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKNS----VNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVT-GDICRVAAWYDNEWAFSLRMLDIALLCYNRI
2GD1 Chain:P ((2-326))--VKVGINGFGRIGRNVFRAALK----NPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNG--NNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASKG


General information:
TITO was launched using:
RESULT:

Template: 2GD1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -231387 for 2697 contacts (-85.8/contact) +
2D Compatibility (PS) -33218 + (NN) -6820 + (LL) 524
1D Compatibility (HY) -27600 + (ID) 8250
Total energy: -306751.0 ( -113.74 by residue)
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2GD1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GD1-query.scw
PDB file : Tito_Scwrl_2GD1.pdb: