Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQL-ALMDDNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTSSFKD---DNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVK---SLREYYRDK-------LLMIDANLNVDQVKQEIESKISCSLV
3L0S Chain:A ((1-223))
MNILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLESKGKDGWLLDGFPRNTVQAQKLFEALQEK-GMKINFVIEILLPREVAKNRIMGRRICKNNPN-HPNNIFIEAIKPNGDVCRVCGGA-LSARADDQDEGAINKRHDIYYNTVDGTLAAAYYYKNMAAKEGFVYIELDGEGSIDSIKDTLLAQLA----
General information:
TITO was launched using:
RESULT:
Template:
3L0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100641 for 1541 contacts (-65.3/contact) +
2D Compatibility (PS) -22563 + (NN) -7592 + (LL) 780
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -145716.0 ( -94.56 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3L0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L0S-query.scw
PDB file :
Tito_Scwrl_3L0S.pdb
: