Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKIIKILREESIKSNYAARDNATKGKILQYENKIFDLAYPYLGNENSNIIAVGFFDYSCGYCKAIKDDIKQLI-NDG-KIKYIFRDTPIL----------------------------------------GNNSLKAAKSALAVYFIDKGKYFDFHYAILDHK----GEF-SDENILDIVKSIGINEDNFNNSMKNNAGKIEQMINDSKFLVRELGAGGTPFLII--GDSLFI---GATDLDVLRKKVDELSHKQN |
3KZQ Chain:A ((2-204)) | -----------------------------------------------------------------------------------------------NIKLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWKLCTPVRSTYQSCRAVIAAGFQD--SYEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDM--DGTLLEGVFQDQLSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERIIENM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KZQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88092 for 1119 contacts (-78.7/contact) +
2D Compatibility (PS) -16752 + (NN) -11567 + (LL) 6500
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -116811.0 ( -104.39 by residue)
QMean score : 0.575
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