Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNRKDLLSVLDFTVNDVGNIIELAGQYLE--NKAANGRILENKTVINLFFEDSTRTLTSFEMAAKSLGANVVTLP-VKSSSINKGEDLTDMIKTLNAMNPDYIVVRQKSSGIVNMLAKHVSCLLINAGDGSSEHPTQALADYFVISSHKKQIKNLKIVICGDILHSRVARSNIRLLKMF-GAKICLVAP-----PTLICKHFPEVDSIYY---SLIEGIKDADVIMLLRLQKERMNSGCFIPSNREYFYLYG-LDSQKLLCAKSNAIVMHPGPINRGIEISSDITD---HIILQQVEFGLAIRKAVLHYYRPC |
| 2RGW Chain:E ((2-296)) | ----KHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYA-DIIVLRHPSEGAARLASEYSQVPIINAG----QHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERF------PDPNEYEKVKGSYKIKREYVEGKKFIIMHPLP--RVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIED |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214636 for 2156 contacts (-99.6/contact) +
2D Compatibility (PS) -29838 + (NN) -9847 + (LL) -8
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -278729.0 ( -129.28 by residue)
QMean score : 0.576
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