Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFLLKPKKSLGQNFILSSEITKRIVVLAGNLEDFNVIEIGPGYGALTKEILAHNPKSLLAIEKDSNLVKCHDQLLNEH--QGKFRIVEADALYVVEEELIERPVKVIANLPYNISLALFLKWLNKIKLFTTFTLMFQKEVADRIIARPNSKDYGSLSVLSQLLCDIRREFDIEPKEFFPRPKVYSSVITVKPLPTQRFAVNLEALTKLTRAVFAQRRKMLRNSLQNVTNRT---ETALENAKLSGNERPKNLTVEQFCLLANNM-------------------------------
1ZQ9 Chain:A ((8-285))
-------------QHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD----LPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPP-PINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS
General information:
TITO was launched using:
RESULT:
Template:
1ZQ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124191 for 1788 contacts (-69.5/contact) +
2D Compatibility (PS) -26462 + (NN) -15277 + (LL) 1388
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -182092.0 ( -101.84 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1ZQ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZQ9-query.scw
PDB file :
Tito_Scwrl_1ZQ9.pdb
: