Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLPGNIEL--NSNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERT---HETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCKSRLPIHGEYT---VAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTSKK---------HVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY
4FF7 Chain:B ((4-236))
-TFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILSIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINSRN----
General information:
TITO was launched using:
RESULT:
Template:
4FF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122934 for 1723 contacts (-71.3/contact) +
2D Compatibility (PS) -23795 + (NN) -8130 + (LL) 288
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -171771.0 ( -99.69 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_4FF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FF7-query.scw
PDB file :
Tito_Scwrl_4FF7.pdb
: