Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAIAIIDFGSQFTQLIARQIREMDVYCEIFPSNISFETI--SKFNGFILSGGPQSVHDGCSEASGVAHEIIKFNEATNVPILGICYGQQLICHYFGAKVKKEFKQEFCKTKIKILKESSIVKDVWNVNSEVDVLMNHADSVETAPQGFTVIASGVINQTIAIVANEQRRIYCTQFHPEVKPTANGSKLLSNFLDIANCKRDWTMKSIIEKQKEKIKNVVGEKKVIAAVSGGVDSSVAVALTYKAVGKQLNCIFIDTGLLRKNQTIAL-----LEEIPVNYVDKSNLFLSRLKGITDPEEKRKIIGNTFIEVFEEEAKKIGN-ADFLMQGTIYSDVVESGHASGNASTIKSHHNVGGLPEKMNLKLVEPLRYLFKDEVRLLGKEIGLSNEIIFQHPFPGPGLAVRVIGEVDEERVRILQEIDEIYINTMKNYDLYDKIWQAFAVLLPIRTVGVMGDGRTYGYVCALRAVTSFDGMTADAFPFENKSQHSLIFWDFLQNVSSIIVNNVSGVNRVVYDLTSKPPATIEWE |
| 2YWB Chain:A ((1-503)) | --MVLVLDFGSQYTRLIARRLRELRAFSLILPGDAPLEEVLKHRPQALILSGGPRSVFDP--DAPRPDP----RLFSSGLPLLGICYGMQLLAQELGGRVERA---EYGKALLTRH-EG---PLFRGLEGEVQVWMSHQDAVTAPPPGWRVVAET-EENPVAAIASPDGRAYGVQFHPEVAHTPKGMQILENFLELAGVKRDWTPEHVLEELLREVRERAGKDRVLLAVSGGVDSSTLALLLAKA-GVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKERFLKALKGVEDPEEKRKIIGREFVAAFSQVARER-GPFRFLAQGTLYPDVIE------------------GLPEDLEFELLEPFRLLFKDEVRELALLLGLPDTLRLRHPFPGPGLAVRVLGEVTEERLEILRRADDIFTSLLREWGLYEKVAQALAVLTPV------------GYVLALRAVTTEDFMTADWARLP---------LEFLDEAARRITRRVPEIGRVVYDLTSKPPATIEWE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -325727 for 3897 contacts (-83.6/contact) +
2D Compatibility (PS) -49522 + (NN) -19299 + (LL) 2888
1D Compatibility (HY) -39200 + (ID) 10350
Total energy: -441210.0 ( -113.22 by residue)
QMean score : 0.531
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