Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLEKIQSDVEDIWKNRSKLSNRSVKRAARVIIKKVIKLLDSGKIRVAERLSDGKWIVHTWIKQAISLYFLTEESKMIDHTGWWFDKVNNKFDGWNEEEFHQSKIRAVPGCFVRQSAYVGTNVVLM-PSFINV---GAYISSGTMIDTWSTIGSC----AQIGKNCHVSGGVGIGGVLEPIQASPVIIEDNCFIGARSEVAEGVIIREGSVLGMGVFIGASTKIIDRETNKVFYGEVPPYSVVVPGSTLSANNISIYCAIIVKKVDEKTRQKTSINEILRD |
1XHD Chain:A ((16-144)) | -----------------------------------------------------------------------------------------------------ASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILH---------SCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGK-------------KIPPNTLAFG----------RPAKVIRELTAEDRKDMERIRTQYVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167302 for 992 contacts (-168.7/contact) +
2D Compatibility (PS) -13826 + (NN) -7358 + (LL) 9872
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -184114.0 ( -185.60 by residue)
QMean score : 0.519
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