Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MQVKKNRINEFITAKEVRLVDHNGEMVGVV--SIGR------ALTFAQNVGLDLVEVAPDSIPPVCKILDYSKQKYDAKKKASEAKKKQKTLTIKEIKLGPNIGDHDYETKLRHARDFLTHGHKIKVTMKFKGRELINTEVGLEKLERLIRDTEDIAKIESAPKREGNQYFLALTTK |
| 1F1M Chain:A ((3-164)) | PNLTEISKKITESNAVVLAVKEVETLLTSIDELAKAIGKKIKSDVSLDNEADHNGSLMSGAYLISTLITKKISAIKDSGELKAEIEKAKKCSEEFTAKLKGEHTDLGKEG--VTDDNAKKAILKTNN-------------DKTKGADELEKLFESVKNLSKAAKEMLTNSVK---ELTSP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29904 for 1130 contacts (26.5/contact) +
2D Compatibility (PS) -16224 + (NN) -3587 + (LL) 1988
1D Compatibility (HY) 2000 + (ID) 1250
Total energy: 12831.0 ( 11.35 by residue)
QMean score : 0.148
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