Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MIPRYSRKEISAIWEENNKFNIWLKIERLACEAQAKLGV-IPSNVAKRLSGAI-TFDVERINEIESTVKHDVIAFLTYIAEKVGVDVRYLHYGMTSSDVLDTCFAVQLKESCNILLENLKNLLAALKKKAEDYKGTICVGRSHGMHAEPTTLGLKFTRFYAEFKRSYQRLINAQKEISICKISGAVGNFANVDPF----------VEEYVAKGMELVPETIS-SQVIPRDRHAMFFSVLGVIASSMENVAVEIRHLQRTEIAEIAEYFSTGQKGSSAMPHKCNPILSENLTGLSRLIRSYVSPALE-NVVLWHERDISHSSVERCIAPDACILMDFALVRLTDLIDKLAINKENIEKNLNSSKGLIFSQRILLELVNSGLTREEAYKIIQGNAMKVKQNNS------DFLFELKQDRSLLEVINSEKLESLF-DLKYYT----KYVDHIYKKVFD-------------- |
| 4NLE Chain:A ((18-485)) | TIPNVLANRYASDEMVAIWSPEAKIIAERRLWLAVLRAQAELGVAVPDGVVEDYERVLENVDLESIAARER-VRHDVKARIEEFNAH-----EHVHKGMTSRDLTENVEQLQIRQSLELVFSHGVAVVARLAERAVVYRDLVMAGRSHNVAAQATTLGKRFASAAEETLVALTRLRELIDRYPLRGVKGPMGTAQDMLDLFGGDVGKLADLERRVAEFLGFTEVFTSVGQVYPRSLDHDVLSALVQFGAGPSSMAHTIRLMAGHEL--VTEGFAPGQVGSSAMPHKMNTRSCERVNGLQVVLRGYASMAAELAGAQWNEGDVFCSVVRRVALPDAFFAIDGQTETFLTVLDEFGAYPAVIQRELDRYLPFLATTRILMAAVRAGVGREAAHEVIKEHAVAVALAMREQGREPDLIDRLAGDPRLP--LDKVALEAALEDKQAFTGAAGDQVDGVVAAVGELVSRYPEAAKYTSG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NLE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231157 for 3301 contacts (-70.0/contact) +
2D Compatibility (PS) -44004 + (NN) -11400 + (LL) 924
1D Compatibility (HY) -21200 + (ID) 6050
Total energy: -312887.0 ( -94.79 by residue)
QMean score : 0.483
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