Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVKIRLARFGAKKRPFYRIVVADSRAPRDGRFIERIGQYDPMLSKDNKNCVVVKADRLKYWLNVGAQASERVLWFIKKGIITLEAEKKKV-ETKKAEIKKVKEQEV
3BN0 Chain:A ((2-97))
-AVRIRLAKFGRKHHPIYRIVVMDAK------YIDILGTYDPKRKV----LINVYPEKVKEWVLKGVELSHRAKAILWNHGILKEVVPEGYEMKRVGDYYVFEKRE-
General information:
TITO was launched using:
RESULT:
Template:
3BN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50047 for 620 contacts (-80.7/contact) +
2D Compatibility (PS) -8738 + (NN) 2575 + (LL) 184
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -63076.0 ( -101.74 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3BN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BN0-query.scw
PDB file :
Tito_Scwrl_3BN0.pdb
: