Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVVV--TGMQPGGQLTITMGVENYPGFVSI-QGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNNDDYYSNAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGAFFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEENPKKVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKS-----FIEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKVYRQAVVAAGTGCMAALDAEKFLECTSK |
2Q0K Chain:B ((6-309)) | -----------IIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFG---LKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDAS--GVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDF-SMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Q0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -221091 for 2518 contacts (-87.8/contact) +
2D Compatibility (PS) -32258 + (NN) -13845 + (LL) 1232
1D Compatibility (HY) -21200 + (ID) 5750
Total energy: -292912.0 ( -116.33 by residue)
QMean score : 0.492
|
|
|