Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTTEGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSRTSKRVLTLEWIGATPVYEVEKLN------NHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDSNNSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQH-KSFVTACRAIGEPIIGQPIQKISFASLLAQLLKITGDFDMKVQTQLLLLQKTMILLEGTCRKIYPEINVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
| 2ZMD Chain:A ((62-322)) | -------------------------------------------------------------------------------------------------------------KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN--Q------------------------------------TLDSYRNEIAYLNKLQQH--SDKIIRLYDYE-ITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEA-VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM-----------------------DSQVGAVNYMPPEAIKDM-----------ISPKSDVWSLGCILYYMTYGKTPFQQ-IINQISKL-HAI--IDP-NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45620 for 1723 contacts (-26.5/contact) +
2D Compatibility (PS) -24614 + (NN) -7139 + (LL) 20048
1D Compatibility (HY) -8400 + (ID) 1800
Total energy: -67525.0 ( -39.19 by residue)
QMean score : 0.298
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