Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKKAVVLLNLGGPDSLSAVRPFLFNLFYDKRIINLPNPFRFFLAKFISAKRENNARKIYEQIGGKSPILENTKMQAEALERELNRSVFCHPSSVTLGPRKENWIPVSRIGMTSKLTKVFICMRYWHPFANEVVKSVKQFDPDEVILLPLYPQYSTTTTLSSIENWQKNAKQYGIK--CNTKIIRHHYDNQDFIEAHANLITKHYKLASEVGKP--RVLFSAHSLPLSVIKKGDPYALQVEETVKLIVKKLHIKDLDWSICYQSKIG-PVKWLEPSTESELLRAKADG--VPVVLLPISFVSEHSETLVELDMEYKTIIKDG----YYFRIPTLSTNSLFIKCLAGLCINHS---------------------------------- |
| 1HRK Chain:A ((1-359)) | RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP--IQNKLAPFIAKRLTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDEL-----------------------SPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCN-PYRLVWQSKV-GPMPWLGPQTDESIKGLCER-GRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149086 for 2629 contacts (-56.7/contact) +
2D Compatibility (PS) -34036 + (NN) -22393 + (LL) 824
1D Compatibility (HY) -23200 + (ID) 5250
Total energy: -233141.0 ( -88.68 by residue)
QMean score : 0.554
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