Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRLIRMSVLA---------SGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARK-YQLPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYI---------FHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDT-DKAIPT----PIYTI |
2P4Z Chain:A ((10-284)) | -HGSVEVQVLIENVVFARNFVAEHGLSLLLKKGNKEIVVDTGQSE-NFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILNKKYAMRKGGQFEEIGFDLSFYEKYKNNFVLID---KDAEIEEGFYVITNTDITYDNEFTTKNFFVEKEGKRIPDKFLDEV----FVVVKEEDGINVVTGCSHAG------ILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTGIDEYGFLKSVLKDKISYLTTSSSIVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91214 for 2109 contacts (-43.2/contact) +
2D Compatibility (PS) -26327 + (NN) -3518 + (LL) 944
1D Compatibility (HY) -12800 + (ID) 1700
Total energy: -134615.0 ( -63.83 by residue)
QMean score : 0.322
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