Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEEILREVADIFIGDDRDSIYDYKTGNELVRFFNHYFNKGDIYQAPFPSRWLYVVKHLQTLIQERKINQFFTLILSNHYIKYELKIDEVEAAKQAAKALKLFNKRLNHYGYYITGTNNARYFMDKDEDTESIGYGGYANIY---LQKSTGLAVKKLKEEYLTDSSIKSRFKREFDLTKSFDTNPLFINVFEF---NESDYSYTMELADETLKDYIES------KTISELEKVKIIMKILKAMSQAHSENKIHRDISSKNVLMFRGK-VKISDLGLGKNLD-EIHSHQTFDTNGVGQYKYCAPEQMYSLKQADKQSDVFSLGRLINFIMT--GNVVNNHHLFRGVSDKATNSSKEYRFEDA-NEMLKMLQRILEYHSSAKH-VEKCQEKLKRGVFDDESEEFIMTRSDEQLCQMVLSSNNNEQACLIRYMQKNESSACDLIESINRKYQEFCGRFEDYDPFAKLAYMILCNNFSYRVNETAARVLNYVAWSVNRFSAQDLIKGLINRGVEPLIEEKLKDN |
| 1FGK Chain:A ((464-762)) | -----------------------------------------------------------------------------------------------------------ELPEDPRWELPRDRLVLGKPLG-----QVVLAEAIGLP-NRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPEE-QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48525 for 1984 contacts (-24.5/contact) +
2D Compatibility (PS) -27609 + (NN) -7919 + (LL) 19204
1D Compatibility (HY) -14400 + (ID) 2950
Total energy: -82199.0 ( -41.43 by residue)
QMean score : 0.281
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