Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRALANFDIN
1GOX Chain:A ((279-359))
--------------RIPVFLDGGVRRGTDVFKALA-LGAAGVFIGRPVVFSLAAEGE----AGVKKVLQMMRDEFELTMALSG--CRSLKEISRSHIAADWD----------
General information:
TITO was launched using:
RESULT:
Template:
1GOX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9189 for 480 contacts (-19.1/contact) +
2D Compatibility (PS) -8316 + (NN) -2722 + (LL) 2136
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -22791.0 ( -47.48 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1GOX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GOX-query.scw
PDB file :
Tito_Scwrl_1GOX.pdb
: