Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQVDQINV-----RNQLWKSTSFK--DYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCPGNFQRLMQLSKRL-PIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKM-SLVIADIMDETTTKDKA |
| 3SC6 Chain:A ((5-284)) | -KERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-AKLVYISTDYVFQGDRP----EGYDEFHNPAPINIYGASKYAGEQFVKELH---NKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFG-----AAAARPK-Y--SIFQ-HNMLRLNGFLQMPSWEEGLERFFIET------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94335 for 2329 contacts (-40.5/contact) +
2D Compatibility (PS) -28368 + (NN) -1336 + (LL) 1240
1D Compatibility (HY) -6400 + (ID) 2450
Total energy: -131649.0 ( -56.53 by residue)
QMean score : 0.408
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