Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIDVSDDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRNSIIQKEHLVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQP--LEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIGEHPKES- |
1HSK Chain:A ((209-317)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKMTEIQAKMDDLTERRESKQPLE--YPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIG---EHPK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -29298 for 695 contacts (-42.2/contact) +
2D Compatibility (PS) -11666 + (NN) -5531 + (LL) 13540
1D Compatibility (HY) -12400 + (ID) 5150
Total energy: -50505.0 ( -72.67 by residue)
QMean score : 0.844
|
|
|